Showing posts with label Panama disease. Show all posts
Showing posts with label Panama disease. Show all posts

Wednesday, November 02, 2016

Can the Cavendish Banana Survive?







With the familiar Cavendish banana in danger, can science help it survive?



Facing down a future with no bananas. Chris RichmondCC BY-NC-ND


The banana is the world’s most popular fruit crop, with over 100 million metric tons produced annually in over 130 tropical and subtropical countries. Edible bananas are the result of a genetic accident in nature that created the seedless fruit we enjoy today.
Virtually all the bananas sold across the Western world belong to the so-called Cavendish subgroup of the species and are genetically nearly identical. These bananas are sterile and dependent on propagation via cloning, either by using suckers and cuttings taken from the underground stem or through modern tissue culture.
The familiar bright yellow Cavendish banana is ubiquitous in supermarkets and fruit bowls, but it is in imminent danger. The vast worldwide monoculture of genetically identical plants leaves the Cavendish intensely vulnerable to disease outbreaks.
Fungal diseases severely devastated the banana industry once in history and it could soon happen again if we do not resolve the cause of these problems. Plant scientists, including us, are working out the genetics of wild banana varieties and banana pathogens as we try to prevent a Cavendish crash.

The cautionary tale of ‘Big Mike’

One of the most prominent examples of genetic vulnerability comes from the banana itself. Up until the 1960s, Gros Michel, or “Big Mike,” was the prime variety grown in commercial plantations. Big Mike was so popular with consumers in the West that the banana industry established ever larger monocultures of this variety. Thousands of hectares of tropical forests in Latin America were converted into vast Gros Michel plantations.
But Big Mike’s popularity led to its doom, when a pandemic whipped through these plantations during the 1950s and ‘60’s. A fungal disease called Fusarium wilt or Panama disease nearly wiped out the Gros Michel and brought the global banana export industry to the brink of collapse. A soilborne pathogen was to blame: The fungus Fusarium oxysporumf.sp. cubense (Foc) infected the plants’ root and vascular system. Unable to transport water and nutrients, the plants wilted and died.

A cross-section of a banana plant, infected with the fungus that causes Fusarium wilt. Gert KemaCC BY
Fusarium wilt is very difficult to control – it spreads easily in soil, water and infected planting material. Fungicide applications in soil or in the plant’s stem are as of yet ineffective. Moreover, the fungus can persist in the soil for several decades, thus prohibiting replanting of susceptible banana plants.

Is history repeating itself?

Cavendish bananas are resistant to those devastating Fusarium wilt Race 1 strains, so were able to replace the Gros Michel when it fell to the disease. Despite being less rich in taste and logistical challenges involved with merchandising this fruit to international markets at an acceptable quality, Cavendish eventually replaced Gros Michel in commercial banana plantations. The entire banana industry was restructured, and to date, Cavendish accounts for 47 percent of the bananas grown worldwide and 99 percent of all bananas sold commercially for export to developed countries.

Bananas in Costa Rica affected by Black Sigatoka. Gert KemaCC BY
But the Cavendish unfortunately has its own weaknesses – most prominently susceptibility to a disease called Black Sigatoka. The fungus Pseudocercospora fijiensis attacks the plants’ leaves, causing cell death that affects photosynthesis and leads to a reduction in fruit production and quality. If Black Sigatoka is left uncontrolled, banana yields can declineby 35 to 50 percent.
Cavendish growers currently manage Black Sigatoka through a combination of pruning infected leaves and applying fungicides. Yearly, it can take 50 or more applications of chemicals to control the disease. Such heavy use of fungicides has negative impacts on the environment and the occupational health of the banana workers, and increases the costs of production. It also helps select for survival the strains of the fungus with higher levels of resistance to these chemicals: As the resistant strains become more prevalent, the disease gets harder to control over time.

Aerial spraying of fungicides on a banana plantation. Gert KemaCC BY
To further aggravate the situation, Cavendish is also now under attack from a recently emerged strain of Fusarium oxysporum, known as Tropical Race 4 (TR4). First identified in the early 1990s in Taiwan, Malaysia and Indonesia, TR4 has since spread to many Southeast Asian countries and on into the Middle East and Africa. If TR4 makes it to Latin America and the Caribbean region, the export banana industry in that part of the world could be in big trouble.
Cavendish varieties have shown little if any resistance against TR4. Growers are relying on temporary solutions – trying to prevent it from entering new regions, using clean planting materials and limiting the transfer of potentially infected soil between farms.

Cavendish banana trees in China infected with new fungal disease TR4. Andre Drenth, UQCC BY
Black Sigatoka and Panama disease both cause serious production losses and are difficult to control. With the right monitoring in place to rapidly intervene and halt their spread, the risks and damage imposed by these diseases can be considerably reduced, as has been recently shown in Australia. But current practices don’t provide the durable solution that’s urgently needed.

Getting started on banana genetic research

If there’s a lesson to be learned from the sad history of Gros Michel, it’s that reliance on a large and genetically uniform monoculture is a risky strategy that is prone to failure. To reduce the vulnerability to diseases, we need more genetic diversity in our cultivated bananas.

Local banana varieties in southern China. Andre Drenth, UQCC BY
Over a thousand species of banana have been recorded in the wild. Although most do not have the desired agronomic characteristics – such as high yields of seedless, nonacidic fruits with long shelf life – that would make them a direct substitute for the Cavendish, they are an untapped genetic resource. Scientists could search within them for resistance genes and other desirable traits to use in engineering and breeding programs.
To date, though, there’s been little effort and insufficient funding for collecting, protecting, characterizing and utilizing wild banana genetic material. Consequently, while almost every other crop used for food production has been significantly improved through plant breeding over the last century, the banana industry has yet to benefit from genetics and plant breeding.
But we have started taking the first steps. We now know the genome sequences of the banana and the fungi that cause Fusarium wilt and Sigatoka. These studies helped illuminate some of the molecular mechanisms by which these fungal pathogens cause disease in the banana. That knowledge provides a basis for identifying disease-resistant genes in wild and cultivated bananas.
Researchers now have the tools to identify resistance genes in wild bananas or other plant species. Then they can use classical plant breeding or genetic engineering to transfer those genes into desired cultivars. Scientists can also use these tools to further study the dynamics and evolution of banana pathogens in the field, and monitor changes in their resistance to fungicides.
Availability of the latest tools and detailed genome sequences, coupled with long-term visionary research in genetics, engineering and plant breeding, can help us keep abreast of the pathogens that are currently menacing the Cavendish banana. Ultimately we need to increase the pool of genetic diversity in cultivated bananas so we’re not dependent on single clones such as the Cavendish or the Gros Michel before it. Otherwise we remain at risk of history repeating itself.

https://theconversation.com/with-the-familiar-cavendish-banana-in-danger-can-science-help-it-survive-64206 

See link above for original article.



Friday, March 11, 2016

Panama Disease - An Update

Still a big story - the ongoing threat of Panama Disease across the world.

More here -http://www.scidev.net/global/farming/news/scientists-fight-deadly-banana-fungus.html?utm_medium=email&utm_source=SciDevNewsletter&utm_campaign=international%20SciDev.Net%20update%3A%2029%20February%202016




Full story below  from www.scidev.net 

Scientists race to halt banana catastrophe

By Caterina Elizondo Lucci, Esther Nakkazi, Inga Vesper, Yao-Hua Law

Scientists in developing countries are scrambling to find a cure for a devastating fungus that threatens to wipe out the global banana trade and plunge millions of farmers into poverty.

Around the world, banana farmers are fighting a losing battle against Tropical Race 4, a soil fungus that kills Cavendish bananas, the only type grown for the international market. The disease was first spotted in the early 1990s in Malaysia, but has now started to wipe out crops in large parts of South-East Asia as well as in Africa and the Middle East. [1]

The Tropical Race 4 pathogen, a new strain of what is known as Panama disease, escaped from Asia in 2013. By 2015, it had infected plantations in Jordan and Mozambique, as well as Lebanon and Pakistan, with many scientists fearing an epidemic in Sub-Saharan Africa. [2]

“The impact on affected farms is immense, with significant losses of plants and the inability to eradicate the fungus from affected fields,” says Altus Viljoen, a plant pathologist at Stellenbosch University in South Africa.

The disease can be devastating for small banana farmers, who provide much of the 17 million tonnes of Cavendish bananas traded every year — mostly to rich countries where the fruit is popular as a healthy snack. [3] Bananas are also a staple food in many tropical countries, and the main source of protein for more than half a billion people around the world.

Tropical Race 4, a variant of the Fusarium oxysporum fungus, is transmitted by infected plant matter, but also from the clothes and shoes of plantation workers.



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In Indonesia and Malaysia, the fungus wiped out more than 5,000 hectares of Cavendish bananas in 1992/93, says Agustin Molina, who leads the banana research efforts in the Asia-Pacific region for Bioversity International, a global research organisation.

“The banana export trade in Malaysia and Indonesia failed to prosper because of Tropical Race 4,” he says. “Now tens of thousands of banana farmers in the Philippines, China and Taiwan could be affected.”

Molina and his team try to work with local farmers to raise awareness of the threat and contain the spread of the fungus. He advocates footbaths, regulating the movement of workers and tough quarantines for seedlings and other imported plant matter.

But despite such efforts, Tropical Race 4 has crossed the Pacific Ocean. With the fungus now in Mozambique, other East African countries largely dependent on Cavendish exports — such as Uganda — fear for their crop.

“If nothing is done in the next ten years, billions of dollars worth of crop will be lost,” says Enoch Kikulwe, an associate scientist at Bioversity International’s Uganda branch.

The reason for Tropical Race 4’s rapid spread is globalised trade (see chart 1). Uganda, the world’s third largest banana producer, imports second-hand trucks and farming equipment from China, but these are rarely disinfected before shipping — putting the country at risk. Likewise, Sudan exports bananas by lorry to Lebanon and Oman, while seedlings grown in Jordan or Pakistan are sold to Mozambique.





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Credit: Panamadisease.org



Once the fungus has infected a plant it spreads to its xylem, the tubular tissue that transports water around the plant from the roots. These tubes get clogged, and the plant wilts and dies. The fungus continues to feed on the dead tissue and releases spores that enter the soil and attach to any material that comes in contact with the plant.

Sub-Saharan African scientists are stepping up research on the disease in the hope of preventing its continuing spread. But funding is scarce and local governments are not yet sufficiently aware, says Eldad Karamura, regional coordinator at the Banana Research Network for Eastern and Southern Africa.

“We are threatened,” he says. “We need greater awareness of the problem by policymakers and to train more scientists and buy equipment,” he adds.

At present, a laboratory at Stellenbosch University in South Africa is the only one in Sub-Saharan Africa that can test for the presence of Tropical Race 4. A Ugandan expert committee on the disease says the country could do testing too, but would need US$2.5 million to set up test facilities. More long-term plans could include research both on genetic modification to produce fungus-resistant plants and on other banana species to replace Cavendish in international markets, the committee says.

Karamura has seen first hand the devastation that Tropical Race 4 causes on banana plantations. “When I visit farms in Mozambique or Asia, I don’t come back to Uganda with my shoes — I leave them there,” he says.

However, the fungus poses the greatest threat to Latin America and the Caribbean. The region is responsible for 25 per cent of bananas grown worldwide, and 80 per cent of global exports. But local farmers are still reeling from a previous infection, this one caused by Tropical Race 1, the first instance of Panama disease.

Panama disease emerged in the 1950s in Latin America, nearly wiping out global trade in the Gros Michel banana, a predecessor to the Cavendish. As with Tropical Race 4, the fungus’s spores can survive in the soil for decades.

To get a sense of the potential impact of Tropical Race4 if it were allowed to spread globally, it helps to talk to Javier Chinchilla, a small-scale farmer of Gros Michel bananas in Costa Rica. He is sticking with the less popular banana type as he cannot compete with larger Cavendish growers.

The ghost of Panama disease haunts him still — his farm used to have 30,000 banana plants in the 1980s, but now he is down to 500.

“We sell Gros Michel at the farmer’s market, but it is increasingly difficult to get good crops” because the fungus lingers in the soil, Chinchilla explains. “My two brothers had to go out of business. Now it’s just me, my father and six other farmers that continue. But our families depend on our work with bananas.”

Chinchilla tries to keep his farm afloat by planting coffee, squash and maize in between the banana plants. But like thousands of other farmers in the region, he has abandoned large swathes of land to Panama disease.

“Production is, to some extent, nomadic,” says Ana Cecilia Tapia, an agronomist at the University of Costa Rica. “Farmers move their farms when a patch is contaminated, since there are no technological resources to attack the disease.”




The experiences of Phillippine banana growers with Panama disease






Faced with the high risk of Tropical Race 4 infection, the Central America-based International Regional Organization for Agricultural Health (OIRSA) has brought together researchers and policymakers.

The group tries to mobilise funds for research and preparation, such as better monitoring of crops. “We also coordinate actions with regional plant protection organisations and set up specialised groups for the care and handling of Tropical Race 4,” says Carlos RamĂ³n UrĂ­as, OIRSA’s regional director for plant health.

The group advocates moving away from the current heavy reliance on Cavendish. There are almost 1,000 different banana species. If more of these were grown for sale, farmers would be less affected by the disease’s arrival, while the fungus would also have less chance to spread.

But the preferences of consumers, mostly in Europe and the United States, restrict these options. The Cavendish, which makes up 47 per cent of all bananas grown globally, is what many customers think the fruit should be: large, long and yellow. Because of this, farmers such as Chinchilla fear buyers will snub local varieties, which might be smaller, savoury or even red or green.




With little international action, the responsibility to find a solution, or at least a coping strategy, for Tropical Race 4 lies with scientists from the global South. [4] Chinchilla is working with researchers from the University of Costa Rica in the hope that it will help his farm survive the fungus, should it hit Central America.


“We keep growing bananas,” he says. “By necessity, but also because we have given the researchers a vote of faith. They want to find a cure.”

References

[1] A. B. Molina and others Recent occurrence of Fusarium oxysporum f. sp. cubense Tropical Race 4 in Asia in ISHS-ProMusa Symposium on Recent Advances in Banana Crop Protection for Sustainable Production and Improved Livelihoods (ISHS, 2007)
[2] N. Ordoñez and others First report of Fusarium oxysporum f. sp. cubense Tropical Race 4 causing Panama disease in Cavendish bananas in Pakistan and Lebanon (Plant Disease, January 2016)
[3] Gianluca Gondolini Fighting banana diseases — the end of Cavendish? (Food and Agriculture Organization of the United Nations, 5 February 2014)
[4] S. Vellema and others The threat of Panama disease to the role of banana and plantain in realising food security: linking local realities to a global problem (Wageningen University, 2013)


This article was originally published on SciDev.Net. Read the original article.




Tuesday, February 09, 2016

Bananas and Disease - A Range of Ideas

Disease may wipe out world's bananas – but here's how we might just save them

Angelina Sanderson Bellamy, Cardiff University

Catastrophe is looming for the banana industry. A new strain has emerged of a soil-borne fungus known as “Panama disease” which can wipe out entire plantations – and it is rapidly spreading around the world. Farmers in Australia, Latin America and across Asia and Africa all fear the worst.

The fungus is almost impossible to stop or eradicate. It moves through soil, so contamination can be as simple as infected dirt travelling from one farm to another on the sole of a shoe, or as complex as soil particles blowing on the wind across long distances – even across oceans, in theory.

Faced with huge losses to a global industry, many have called for a new strain of disease-resistant “superbanana”. However, this would be just another temporary fix. After all, the world’s most popular banana, the Cavendish, was itself the wonder fruit of its day, being introduced in the 1950s after an earlier strain of Panama disease destroyed its predecessor.










           
           







              Panama disease causes banana plants to wilt and die.
              Scot Nelson
           
   

The fungi simply adapted and fought back, though, until the Cavendish also became susceptible. Panama and other diseases will continue to do so until we seriously reform how we grow and market bananas.

The banana industry is its own worst enemy. The huge farms where most exported bananas are grown are ideal for pests. These plantations are monocultures, which means they grow only bananas and nothing else. With very few shifts between crops over the years, and lots of tropical sunshine, there is an abundant and year-round supply of food for pests without any breaks, in time or space, to disrupt the supply and lower the disease pressure.

Banana producers spend a third of their income on controlling these pests, according to a study I published in 2013. Chemicals to control microscopic but deadly worms are applied several times a year. Herbicides that control weeds are applied up to eight times a year, while bananas may be sprayed with fungicides from a plane more than 50 times per year in order to control Black Sigatoka, an airborne fungus.










           
           







              Keep out, pests!
              Fairsing
           
         

And those bags that are wrapped around each individual banana bunch? They’re lined with insecticides to serve as both a physical and chemical barrier to insects feeding on and damaging the skins.

All of this amounts to approximately one litre of active ingredients for every 18.6 kg box of bananas that is exported to consumers in the global north. It’s a huge, long-running problem for the industry and the new strain of Panama disease may just be the nail in its coffin.

Or maybe this is the wake-up call the export banana industry so desperately needs.

Searching for the superbanana

Given the way the fungus spreads, containment and quarantine are hardly long-term solutions. Some experts, especially those entrenched in the business of growing export bananas, argue that we need to breed or genetically modify a new type of banana that is resistant to the latest strain of Panama disease.

But this is harder than it sounds. Modern bananas – the tasty yellow ones – don’t exist in nature; they were bred into existence around 10,000 years ago. They reproduce asexually, which means they don’t have seeds and every banana is a genetic clone of the previous generation.

This lack of genetic variation makes breeding a new banana particularly challenging. If one Cavendish is susceptible to a disease, all others will be too. When all bananas are clones, how do you create the genetic variation from which traits for better disease resistance can be identified and nurtured?


           
           







              Identical bananas – and only bananas – for miles on end.
              underworld / shutterstock
           
         

A new banana would also have to be tasty, durable enough to withstand long voyages without bruising, and bright yellow. Looks really do trump pest-resistance. A new type of banana introduced during a previous Panama disease panic back in the 1920s was rejected by consumers for going black on the outside, even when it was ripe and sweet inside.

Saving the banana

Today, banana growers are in a fight for survival, continuously applying newly-formulated fungicides in an effort to keep ahead of the diseases. But they are acutely aware that they are losing ground. While breeding a new banana staves off the current problem, history has already shown that this doesn’t get to the root of the problem, which is the design of the production system.

We need to ditch the massive farms. Around the world, millions of small-scale farmers already grow bananas in a more organic and sustainable way. Alongside bananas are cacao, avocado, mango, corn, orange, lemon and more. A mix of crops creates more stable production systems which rely on fewer, if any, pesticides and generates diverse income sources, handing local people greater food sovereignty. Farms where bananas are mixed in with other crops are also more resilient to climate change which is likely to hit banana-producing regions – developing countries – harder than most.

Yes, this would mean fewer bananas are grown. Sustainable agriculture simply can’t keep up with the megafarms. But if we learned to ignore the odd blemished or undersized banana, then the actual amount sent to market need not drop at all.

The farmers themselves should be okay as they’ll make up their income by producing different crops. Breaking the dominance of the banana multinationals should also distribute wealth among more farmers and empower the regions where they’re grown. As a consumer, ask yourself this: isn’t that a far better way to spend your money?



Angelina Sanderson Bellamy, Research Associate, Sustainable Places Research Institute, Cardiff University

This article was originally published on The Conversation. Read the original article.
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This is but one view, and a variety of views is always worth hearing.  There is a lot of research occurring to deal with the proliferation of Panama Disease TR4.  Agricultural science research focused on solutions!.

Also relevant is a need to improve the nutrition quality of bananas in regions especially where it is a staple food eg Uganda and other parts of Africa.  Progress is being made, supported by the Gates Foundation.  Loss of bananas as a crop in these regions would be a very serious issue.  Genetics are at the forefront of the scientific work to find a solution.

The picture worldwide with bananas is far from the gloom and doom portrayed in this article. It might not be all beer and skittles,  but a lot of bananas are still being produced and shipped around the world.

Biosecurity programs, cultural and agronomic interventions and management are somewhat mitigating the disease spread in areas known to have the disease, but it is spreading slowly - absolutely correct.  And it is a steady "war "between plant disease and plant varieties - across many different crops, with new disease resistant varieties produced regularly across many crops yet the diseases continue to adapt and infect crops that are either not resistant, or the disease adapting to forma modified strain.  It has been that way for thousands of years.  Genetics at work, Even if more difficult in a cloned variety.

But banana demand in many regions also is expanding.  It is a fruit of choice quite often in many countries, so pressure to develop solutions is high.  And there may well be multiple solutions.